Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Gm16215-201ENSMUST00000161990 637 ntBASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Gm17330-201ENSMUST00000221047 165 ntBASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav5d-4Q5R1F6 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav5d-4Q5R1F6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms