Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 AC113060.1-201ENSMUST00000225689 1573 ntBASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Gm12015-201ENSMUST00000117065 843 ntBASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Shank3Q4ACU6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Gm19459-201ENSMUST00000176240 835 ntBASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Gm8494-201ENSMUST00000178171 1233 ntBASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Gm12266-201ENSMUST00000120311 962 ntBASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Gm5616-201ENSMUST00000165252 384 ntBASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Gm8741-201ENSMUST00000174736 384 ntBASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank3Q4ACU6 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Gm14999-201ENSMUST00000121039 624 ntBASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Gm5070-201ENSMUST00000177599 862 ntBASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Gm27530-201ENSMUST00000184096 98 ntBASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shank3Q4ACU6 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.17■□□□□ 0.18
Shank3Q4ACU6 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shank3Q4ACU6 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shank3Q4ACU6 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Shank3Q4ACU6 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Shank3Q4ACU6 Gm6506-201ENSMUST00000119775 1136 ntBASIC16.17■□□□□ 0.18
Shank3Q4ACU6 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Shank3Q4ACU6 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shank3Q4ACU6 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Shank3Q4ACU6 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC16.17■□□□□ 0.18
Shank3Q4ACU6 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Shank3Q4ACU6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shank3Q4ACU6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Shank3Q4ACU6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shank3Q4ACU6 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC16.17■□□□□ 0.18
Shank3Q4ACU6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shank3Q4ACU6 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms