Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim80Q3V061 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim80Q3V061 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim80Q3V061 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.83□□□□□ -0.2
Trim80Q3V061 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim80Q3V061 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim80Q3V061 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim80Q3V061 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trim80Q3V061 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim80Q3V061 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim80Q3V061 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim80Q3V061 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Trim80Q3V061 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.82□□□□□ -0.2
Trim80Q3V061 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.82□□□□□ -0.2
Trim80Q3V061 Gm15483-201ENSMUST00000120338 456 ntBASIC13.82□□□□□ -0.2
Trim80Q3V061 Gm27680-201ENSMUST00000184192 160 ntBASIC13.82□□□□□ -0.2
Trim80Q3V061 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim80Q3V061 Gm29541-201ENSMUST00000191351 678 ntBASIC13.82□□□□□ -0.2
Trim80Q3V061 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim80Q3V061 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Gm2423-201ENSMUST00000074863 733 ntBASIC13.82□□□□□ -0.2
Trim80Q3V061 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim80Q3V061 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Trim80Q3V061 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim80Q3V061 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim80Q3V061 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim80Q3V061 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim80Q3V061 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim80Q3V061 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim80Q3V061 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim80Q3V061 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.81□□□□□ -0.2
Trim80Q3V061 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim80Q3V061 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Gm28631-201ENSMUST00000190740 334 ntBASIC13.81□□□□□ -0.2
Trim80Q3V061 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.81□□□□□ -0.2
Trim80Q3V061 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim80Q3V061 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim80Q3V061 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim80Q3V061 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim80Q3V061 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Trim80Q3V061 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim80Q3V061 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim80Q3V061 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim80Q3V061 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.8□□□□□ -0.2
Trim80Q3V061 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim80Q3V061 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim80Q3V061 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms