Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Gm22189-201ENSMUST00000103822 86 ntBASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Gm26464-201ENSMUST00000157094 305 ntBASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Gm38144-201ENSMUST00000192790 465 ntBASIC12.59□□□□□ -0.39
Brf2Q3UAW9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Gm20949-201ENSMUST00000206478 952 ntBASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Brf2Q3UAW9 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Brf2Q3UAW9 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Brf2Q3UAW9 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Gm5354-201ENSMUST00000182417 973 ntBASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Brf2Q3UAW9 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Gm15376-201ENSMUST00000122258 783 ntBASIC12.57□□□□□ -0.4
Brf2Q3UAW9 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.57□□□□□ -0.4
Brf2Q3UAW9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms