Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Gm15770-201ENSMUST00000117498 584 ntBASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Gm6415-201ENSMUST00000118488 348 ntBASIC14.17□□□□□ -0.14
Trim43aQ3TL54 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Gm24420-201ENSMUST00000176676 59 ntBASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43aQ3TL54 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.16□□□□□ -0.14
Trim43aQ3TL54 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Gm6912-201ENSMUST00000117218 544 ntBASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Gm14057-201ENSMUST00000120631 482 ntBASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Mir1897-201ENSMUST00000122581 272 ntBASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Gm4804-201ENSMUST00000182234 999 ntBASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Mir7221-201ENSMUST00000184009 72 ntBASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Gm45841-201ENSMUST00000207700 164 ntBASIC14.16□□□□□ -0.14
Trim43aQ3TL54 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43aQ3TL54 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms