Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cul4aQ3TCH7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cul4aQ3TCH7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Gm27306-201ENSMUST00000183970 107 ntBASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Cul4aQ3TCH7 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cul4aQ3TCH7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cul4aQ3TCH7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cul4aQ3TCH7 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Cul4aQ3TCH7 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cul4aQ3TCH7 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.02□□□□□ -0.16
Cul4aQ3TCH7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cul4aQ3TCH7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cul4aQ3TCH7 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cul4aQ3TCH7 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Cul4aQ3TCH7 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.02□□□□□ -0.16
Cul4aQ3TCH7 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cul4aQ3TCH7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cul4aQ3TCH7 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.02□□□□□ -0.17
Cul4aQ3TCH7 Gm21854-201ENSMUST00000179901 471 ntBASIC14.02□□□□□ -0.17
Cul4aQ3TCH7 Gm38144-201ENSMUST00000192790 465 ntBASIC14.02□□□□□ -0.17
Cul4aQ3TCH7 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.02□□□□□ -0.17
Cul4aQ3TCH7 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cul4aQ3TCH7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cul4aQ3TCH7 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cul4aQ3TCH7 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cul4aQ3TCH7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cul4aQ3TCH7 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cul4aQ3TCH7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cul4aQ3TCH7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cul4aQ3TCH7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cul4aQ3TCH7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cul4aQ3TCH7 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cul4aQ3TCH7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cul4aQ3TCH7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.01□□□□□ -0.17
Cul4aQ3TCH7 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms