Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Q3KNL4 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.13□□□□□ -0.31
Q3KNL4 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Q3KNL4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.13□□□□□ -0.31
Q3KNL4 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.13□□□□□ -0.31
Q3KNL4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Q3KNL4 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Q3KNL4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.13□□□□□ -0.31
Q3KNL4 Gm13453-201ENSMUST00000118708 357 ntBASIC13.13□□□□□ -0.31
Q3KNL4 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Q3KNL4 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.13□□□□□ -0.31
Q3KNL4 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Q3KNL4 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Q3KNL4 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Q3KNL4 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.13□□□□□ -0.31
Q3KNL4 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.13□□□□□ -0.31
Q3KNL4 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Q3KNL4 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Q3KNL4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.12□□□□□ -0.31
Q3KNL4 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.12□□□□□ -0.31
Q3KNL4 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.12□□□□□ -0.31
Q3KNL4 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Gm27321-201ENSMUST00000185021 205 ntBASIC13.12□□□□□ -0.31
Q3KNL4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.12□□□□□ -0.31
Q3KNL4 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.12□□□□□ -0.31
Q3KNL4 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Q3KNL4 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Q3KNL4 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Q3KNL4 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.12□□□□□ -0.31
Q3KNL4 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Q3KNL4 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Q3KNL4 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.12□□□□□ -0.31
Q3KNL4 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.12□□□□□ -0.31
Q3KNL4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Q3KNL4 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Q3KNL4 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Q3KNL4 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Q3KNL4 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.11□□□□□ -0.31
Q3KNL4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Q3KNL4 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Q3KNL4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.11□□□□□ -0.31
Q3KNL4 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Q3KNL4 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Q3KNL4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms