Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Ush2AQ2QI47 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
Ush2AQ2QI47 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
Ush2AQ2QI47 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ush2AQ2QI47 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Gm11560-201ENSMUST00000117567 948 ntBASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Gm45592-201ENSMUST00000209605 1043 ntBASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Gm2965-201ENSMUST00000198365 343 ntBASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Gm44647-201ENSMUST00000207402 428 ntBASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Gm11836-201ENSMUST00000121022 441 ntBASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 AC131690.1-201ENSMUST00000218406 374 ntBASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Gm10288-201ENSMUST00000084614 537 ntBASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Gm23604-201ENSMUST00000104311 132 ntBASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 n-R5s84-201ENSMUST00000122591 109 ntBASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Mir6953-201ENSMUST00000184745 68 ntBASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Gm29548-201ENSMUST00000187012 694 ntBASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Gm28105-201ENSMUST00000187788 694 ntBASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Gm43186-201ENSMUST00000198130 824 ntBASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Gm45094-201ENSMUST00000207013 617 ntBASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Gm6331-201ENSMUST00000217890 450 ntBASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ush2AQ2QI47 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm18776-201ENSMUST00000188833 654 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm6946-201ENSMUST00000182237 987 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms