Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Gm6916-202ENSMUST00000205523 195 ntBASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ptchd3Q0EEE2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Syt7-205ENSMUST00000224135 1557 ntBASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Shd-206ENSMUST00000225145 998 ntBASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ptchd3Q0EEE2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ptchd3Q0EEE2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ptchd3Q0EEE2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Gm12428-201ENSMUST00000119844 727 ntBASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Gm27618-201ENSMUST00000183671 60 ntBASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Gm27533-201ENSMUST00000183800 152 ntBASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ptchd3Q0EEE2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.88□□□□□ -0.35
Ptchd3Q0EEE2 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms