Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.79□□□□□ -0.36
Hoxc4Q08624 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxc4Q08624 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.79□□□□□ -0.36
Hoxc4Q08624 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Gm11591-201ENSMUST00000120063 702 ntBASIC12.78□□□□□ -0.36
Hoxc4Q08624 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Hoxc4Q08624 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Gm19931-201ENSMUST00000198920 368 ntBASIC12.78□□□□□ -0.36
Hoxc4Q08624 Gm43118-201ENSMUST00000199149 775 ntBASIC12.78□□□□□ -0.36
Hoxc4Q08624 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxc4Q08624 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.78□□□□□ -0.36
Hoxc4Q08624 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc4Q08624 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc4Q08624 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc4Q08624 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc4Q08624 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc4Q08624 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc4Q08624 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc4Q08624 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc4Q08624 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc4Q08624 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc4Q08624 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc4Q08624 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Hoxc4Q08624 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Gm12363-201ENSMUST00000122250 668 ntBASIC12.77□□□□□ -0.37
Hoxc4Q08624 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Hoxc4Q08624 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.77□□□□□ -0.37
Hoxc4Q08624 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.77□□□□□ -0.37
Hoxc4Q08624 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.77□□□□□ -0.37
Hoxc4Q08624 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.77□□□□□ -0.37
Hoxc4Q08624 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc4Q08624 Rubie-203ENSMUST00000227803 2430 ntBASIC12.77□□□□□ -0.37
Hoxc4Q08624 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms