Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tff1Q08423 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Tff1Q08423 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Tff1Q08423 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tff1Q08423 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tff1Q08423 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tff1Q08423 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tff1Q08423 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tff1Q08423 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
Tff1Q08423 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.12□□□□□ -0.63
Tff1Q08423 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.12□□□□□ -0.63
Tff1Q08423 Gm24694-201ENSMUST00000180054 110 ntBASIC11.12□□□□□ -0.63
Tff1Q08423 Gm27663-201ENSMUST00000184839 110 ntBASIC11.12□□□□□ -0.63
Tff1Q08423 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.12□□□□□ -0.63
Tff1Q08423 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Tff1Q08423 Gm45384-201ENSMUST00000210451 277 ntBASIC11.12□□□□□ -0.63
Tff1Q08423 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Tff1Q08423 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tff1Q08423 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tff1Q08423 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Tff1Q08423 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tff1Q08423 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Tff1Q08423 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tff1Q08423 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tff1Q08423 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tff1Q08423 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tff1Q08423 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tff1Q08423 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Tff1Q08423 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tff1Q08423 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Tff1Q08423 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tff1Q08423 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tff1Q08423 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tff1Q08423 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Tff1Q08423 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Tff1Q08423 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Tff1Q08423 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Tff1Q08423 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.11□□□□□ -0.63
Tff1Q08423 Gm15321-201ENSMUST00000121290 288 ntBASIC11.11□□□□□ -0.63
Tff1Q08423 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.11□□□□□ -0.63
Tff1Q08423 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Gm33320-201ENSMUST00000192232 530 ntBASIC11.11□□□□□ -0.63
Tff1Q08423 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.11□□□□□ -0.63
Tff1Q08423 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Tff1Q08423 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Tff1Q08423 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Tff1Q08423 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Tff1Q08423 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Tff1Q08423 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.11□□□□□ -0.63
Tff1Q08423 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Tff1Q08423 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Tff1Q08423 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Tff1Q08423 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tff1Q08423 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Tff1Q08423 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.1□□□□□ -0.63
Tff1Q08423 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tff1Q08423 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.1□□□□□ -0.63
Tff1Q08423 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms