Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Ebf1Q07802 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ebf1Q07802 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.53□□□□□ -0.24
Ebf1Q07802 Gm1335-201ENSMUST00000121653 386 ntBASIC13.53□□□□□ -0.24
Ebf1Q07802 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.53□□□□□ -0.24
Ebf1Q07802 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ebf1Q07802 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ebf1Q07802 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Gm38002-201ENSMUST00000193255 180 ntBASIC13.53□□□□□ -0.24
Ebf1Q07802 Gm38266-201ENSMUST00000194931 421 ntBASIC13.53□□□□□ -0.24
Ebf1Q07802 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.53□□□□□ -0.24
Ebf1Q07802 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.53□□□□□ -0.24
Ebf1Q07802 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ebf1Q07802 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ebf1Q07802 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.53□□□□□ -0.24
Ebf1Q07802 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Ebf1Q07802 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ebf1Q07802 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.52□□□□□ -0.24
Ebf1Q07802 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf1Q07802 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.52□□□□□ -0.24
Ebf1Q07802 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf1Q07802 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf1Q07802 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Ebf1Q07802 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf1Q07802 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf1Q07802 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf1Q07802 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf1Q07802 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf1Q07802 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Ebf1Q07802 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf1Q07802 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf1Q07802 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf1Q07802 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf1Q07802 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ebf1Q07802 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.52□□□□□ -0.25
Ebf1Q07802 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 Gm27682-201ENSMUST00000183930 110 ntBASIC13.52□□□□□ -0.25
Ebf1Q07802 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.52□□□□□ -0.25
Ebf1Q07802 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.52□□□□□ -0.25
Ebf1Q07802 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.52□□□□□ -0.25
Ebf1Q07802 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.52□□□□□ -0.25
Ebf1Q07802 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.52□□□□□ -0.25
Ebf1Q07802 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.52□□□□□ -0.25
Ebf1Q07802 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Ebf1Q07802 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ebf1Q07802 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.51□□□□□ -0.25
Ebf1Q07802 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
Ebf1Q07802 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf1Q07802 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ebf1Q07802 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms