Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn6Q03958 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn6Q03958 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.44□□□□□ -0.26
Pfdn6Q03958 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn6Q03958 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Pfdn6Q03958 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn6Q03958 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn6Q03958 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn6Q03958 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pfdn6Q03958 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn6Q03958 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn6Q03958 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn6Q03958 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.44□□□□□ -0.26
Pfdn6Q03958 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.43□□□□□ -0.26
Pfdn6Q03958 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Gm12485-201ENSMUST00000119641 291 ntBASIC13.43□□□□□ -0.26
Pfdn6Q03958 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Gm28760-201ENSMUST00000185995 736 ntBASIC13.43□□□□□ -0.26
Pfdn6Q03958 Gm29667-201ENSMUST00000190817 490 ntBASIC13.43□□□□□ -0.26
Pfdn6Q03958 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.43□□□□□ -0.26
Pfdn6Q03958 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Gm5279-201ENSMUST00000199575 745 ntBASIC13.43□□□□□ -0.26
Pfdn6Q03958 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pfdn6Q03958 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.43□□□□□ -0.26
Pfdn6Q03958 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.43□□□□□ -0.26
Pfdn6Q03958 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.43□□□□□ -0.26
Pfdn6Q03958 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.43□□□□□ -0.26
Pfdn6Q03958 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn6Q03958 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.42□□□□□ -0.26
Pfdn6Q03958 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pfdn6Q03958 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.42□□□□□ -0.26
Pfdn6Q03958 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.42□□□□□ -0.26
Pfdn6Q03958 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn6Q03958 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pfdn6Q03958 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pfdn6Q03958 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pfdn6Q03958 Syt7-204ENSMUST00000223586 1344 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms