Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Gm38144-201ENSMUST00000192790 465 ntBASIC12.64□□□□□ -0.39
Nkx3-2P97503 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.64□□□□□ -0.39
Nkx3-2P97503 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.64□□□□□ -0.39
Nkx3-2P97503 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.64□□□□□ -0.39
Nkx3-2P97503 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.64□□□□□ -0.39
Nkx3-2P97503 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.64□□□□□ -0.39
Nkx3-2P97503 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.63□□□□□ -0.39
Nkx3-2P97503 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Gm5687-201ENSMUST00000118252 640 ntBASIC12.63□□□□□ -0.39
Nkx3-2P97503 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Gm24196-201ENSMUST00000179161 110 ntBASIC12.63□□□□□ -0.39
Nkx3-2P97503 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.63□□□□□ -0.39
Nkx3-2P97503 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Gm42550-201ENSMUST00000201553 960 ntBASIC12.63□□□□□ -0.39
Nkx3-2P97503 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Nkx3-2P97503 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.63□□□□□ -0.39
Nkx3-2P97503 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.63□□□□□ -0.39
Nkx3-2P97503 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.63□□□□□ -0.39
Nkx3-2P97503 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.63□□□□□ -0.39
Nkx3-2P97503 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx3-2P97503 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx3-2P97503 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms