Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Gm12012-201ENSMUST00000118857 1066 ntBASIC16.65■□□□□ 0.26
Nkx2-3P97334 Gm14726-201ENSMUST00000120623 896 ntBASIC16.65■□□□□ 0.26
Nkx2-3P97334 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC16.65■□□□□ 0.26
Nkx2-3P97334 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC16.65■□□□□ 0.26
Nkx2-3P97334 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Gm8862-201ENSMUST00000198379 1346 ntBASIC16.65■□□□□ 0.26
Nkx2-3P97334 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Nkx2-3P97334 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nkx2-3P97334 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nkx2-3P97334 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.64■□□□□ 0.25
Nkx2-3P97334 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.64■□□□□ 0.25
Nkx2-3P97334 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Gm23270-201ENSMUST00000104055 131 ntBASIC16.64■□□□□ 0.25
Nkx2-3P97334 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Gm12715-201ENSMUST00000121430 1128 ntBASIC16.64■□□□□ 0.25
Nkx2-3P97334 Gm25668-201ENSMUST00000157700 129 ntBASIC16.64■□□□□ 0.25
Nkx2-3P97334 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC16.64■□□□□ 0.25
Nkx2-3P97334 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-3P97334 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nkx2-3P97334 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.63■□□□□ 0.25
Nkx2-3P97334 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Gm11222-201ENSMUST00000119005 738 ntBASIC16.63■□□□□ 0.25
Nkx2-3P97334 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC16.63■□□□□ 0.25
Nkx2-3P97334 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Mir5132-201ENSMUST00000175166 71 ntBASIC16.63■□□□□ 0.25
Nkx2-3P97334 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC16.63■□□□□ 0.25
Nkx2-3P97334 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Mir433-201ENSMUST00000093564 124 ntBASIC16.63■□□□□ 0.25
Nkx2-3P97334 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Gm4366-201ENSMUST00000201488 1342 ntBASIC16.63■□□□□ 0.25
Nkx2-3P97334 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC16.63■□□□□ 0.25
Nkx2-3P97334 Gm6015-201ENSMUST00000217493 1586 ntBASIC16.63■□□□□ 0.25
Nkx2-3P97334 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-3P97334 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.63■□□□□ 0.25
Nkx2-3P97334 Daam2-202ENSMUST00000224595 1926 ntBASIC16.62■□□□□ 0.25
Nkx2-3P97334 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-3P97334 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.62■□□□□ 0.25
Nkx2-3P97334 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms