Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Gm45212-201ENSMUST00000205831 3403 ntBASIC8.82□□□□□ -1
PrkdcP97313 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
PrkdcP97313 Gm13328-201ENSMUST00000120816 1020 ntBASIC8.82□□□□□ -1
PrkdcP97313 Gm8199-201ENSMUST00000121323 823 ntBASIC8.82□□□□□ -1
PrkdcP97313 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC8.82□□□□□ -1
PrkdcP97313 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC8.82□□□□□ -1
PrkdcP97313 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC8.82□□□□□ -1
PrkdcP97313 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC8.82□□□□□ -1
PrkdcP97313 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Gm44645-201ENSMUST00000205492 1653 ntBASIC8.82□□□□□ -1
PrkdcP97313 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
PrkdcP97313 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC8.82□□□□□ -1
PrkdcP97313 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 CT010486.3-201ENSMUST00000224555 811 ntBASIC8.82□□□□□ -1
PrkdcP97313 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Gm9361-201ENSMUST00000198695 1507 ntBASIC8.82□□□□□ -1
PrkdcP97313 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC8.82□□□□□ -1
PrkdcP97313 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC8.82□□□□□ -1
PrkdcP97313 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
PrkdcP97313 AC135669.1-202ENSMUST00000216742 540 ntBASIC8.82□□□□□ -1
PrkdcP97313 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC8.82□□□□□ -1
PrkdcP97313 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
PrkdcP97313 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC8.81□□□□□ -1
PrkdcP97313 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC8.81□□□□□ -1
PrkdcP97313 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Gm6161-201ENSMUST00000121942 1102 ntBASIC8.81□□□□□ -1
PrkdcP97313 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
PrkdcP97313 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Gm6153-201ENSMUST00000172004 1058 ntBASIC8.81□□□□□ -1
PrkdcP97313 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
PrkdcP97313 Gm5641-202ENSMUST00000198699 1080 ntBASIC8.81□□□□□ -1
PrkdcP97313 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC8.81□□□□□ -1
PrkdcP97313 Gm45133-201ENSMUST00000207548 2773 ntBASIC8.81□□□□□ -1
PrkdcP97313 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC8.81□□□□□ -1
PrkdcP97313 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
PrkdcP97313 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Rprl1-201ENSMUST00000158050 327 ntBASIC8.81□□□□□ -1
PrkdcP97313 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Gm17798-201ENSMUST00000182282 1035 ntBASIC8.81□□□□□ -1
PrkdcP97313 Gm42511-201ENSMUST00000196160 234 ntBASIC8.81□□□□□ -1
PrkdcP97313 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC8.81□□□□□ -1
PrkdcP97313 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC8.81□□□□□ -1
PrkdcP97313 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Gm7278-201ENSMUST00000119836 1401 ntBASIC8.81□□□□□ -1
PrkdcP97313 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC8.81□□□□□ -1
PrkdcP97313 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms