Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.53□□□□□ -0.08
Trim43cP86449 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim43cP86449 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43cP86449 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.52□□□□□ -0.08
Trim43cP86449 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43cP86449 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43cP86449 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43cP86449 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trim43cP86449 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43cP86449 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43cP86449 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43cP86449 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Trim43cP86449 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.52□□□□□ -0.08
Trim43cP86449 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43cP86449 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43cP86449 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43cP86449 Gm28911-201ENSMUST00000188837 117 ntBASIC14.52□□□□□ -0.09
Trim43cP86449 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43cP86449 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43cP86449 Gm45384-201ENSMUST00000210451 277 ntBASIC14.52□□□□□ -0.09
Trim43cP86449 Gm18041-201ENSMUST00000218210 618 ntBASIC14.52□□□□□ -0.09
Trim43cP86449 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43cP86449 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trim43cP86449 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43cP86449 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43cP86449 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trim43cP86449 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43cP86449 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43cP86449 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43cP86449 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43cP86449 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43cP86449 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43cP86449 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.52□□□□□ -0.09
Trim43cP86449 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43cP86449 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43cP86449 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Trim43cP86449 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Trim43cP86449 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.51□□□□□ -0.09
Trim43cP86449 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43cP86449 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim43cP86449 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43cP86449 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.51□□□□□ -0.09
Trim43cP86449 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43cP86449 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43cP86449 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43cP86449 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Trim43cP86449 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43cP86449 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43cP86449 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.51□□□□□ -0.09
Trim43cP86449 Gm23984-201ENSMUST00000157139 203 ntBASIC14.51□□□□□ -0.09
Trim43cP86449 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43cP86449 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43cP86449 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim43cP86449 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim43cP86449 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim43cP86449 Gm9908-201ENSMUST00000211534 448 ntBASIC14.51□□□□□ -0.09
Trim43cP86449 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.51□□□□□ -0.09
Trim43cP86449 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43cP86449 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43cP86449 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43cP86449 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43cP86449 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43cP86449 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43cP86449 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.51□□□□□ -0.09
Trim43cP86449 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Trim43cP86449 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim43cP86449 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim43cP86449 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.5□□□□□ -0.09
Trim43cP86449 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Gm15371-201ENSMUST00000117057 784 ntBASIC14.5□□□□□ -0.09
Trim43cP86449 Gm12138-201ENSMUST00000122180 951 ntBASIC14.5□□□□□ -0.09
Trim43cP86449 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.5□□□□□ -0.09
Trim43cP86449 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.5□□□□□ -0.09
Trim43cP86449 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.5□□□□□ -0.09
Trim43cP86449 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.5□□□□□ -0.09
Trim43cP86449 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.5□□□□□ -0.09
Trim43cP86449 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.5□□□□□ -0.09
Trim43cP86449 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43cP86449 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.5□□□□□ -0.09
Trim43cP86449 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms