Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Gm20445-201ENSMUST00000061905 565 ntBASIC13.76□□□□□ -0.21
Trim43bP86448 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.76□□□□□ -0.21
Trim43bP86448 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim43bP86448 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim43bP86448 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Trim43bP86448 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim43bP86448 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim43bP86448 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Trim43bP86448 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Trim43bP86448 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim43bP86448 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.75□□□□□ -0.21
Trim43bP86448 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim43bP86448 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim43bP86448 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.75□□□□□ -0.21
Trim43bP86448 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim43bP86448 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Trim43bP86448 Gm15393-201ENSMUST00000120499 219 ntBASIC13.75□□□□□ -0.21
Trim43bP86448 Gm15321-201ENSMUST00000121290 288 ntBASIC13.75□□□□□ -0.21
Trim43bP86448 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim43bP86448 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.75□□□□□ -0.21
Trim43bP86448 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.75□□□□□ -0.21
Trim43bP86448 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim43bP86448 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim43bP86448 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.75□□□□□ -0.21
Trim43bP86448 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43bP86448 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trim43bP86448 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trim43bP86448 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.74□□□□□ -0.21
Trim43bP86448 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.74□□□□□ -0.21
Trim43bP86448 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.74□□□□□ -0.21
Trim43bP86448 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Trim43bP86448 Gm4804-201ENSMUST00000182234 999 ntBASIC13.74□□□□□ -0.21
Trim43bP86448 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.74□□□□□ -0.21
Trim43bP86448 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trim43bP86448 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.74□□□□□ -0.21
Trim43bP86448 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43bP86448 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trim43bP86448 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43bP86448 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms