Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb1P70662 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ldb1P70662 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb1P70662 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.31□□□□□ -0.28
Ldb1P70662 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb1P70662 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb1P70662 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Ldb1P70662 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.31□□□□□ -0.28
Ldb1P70662 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb1P70662 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.31□□□□□ -0.28
Ldb1P70662 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb1P70662 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb1P70662 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ldb1P70662 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb1P70662 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.31□□□□□ -0.28
Ldb1P70662 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ldb1P70662 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ldb1P70662 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.31□□□□□ -0.28
Ldb1P70662 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb1P70662 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.31□□□□□ -0.28
Ldb1P70662 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.31□□□□□ -0.28
Ldb1P70662 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb1P70662 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.31□□□□□ -0.28
Ldb1P70662 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb1P70662 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb1P70662 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ldb1P70662 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.31□□□□□ -0.28
Ldb1P70662 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb1P70662 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb1P70662 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ldb1P70662 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.3□□□□□ -0.28
Ldb1P70662 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.3□□□□□ -0.28
Ldb1P70662 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Gm12859-201ENSMUST00000117834 427 ntBASIC13.3□□□□□ -0.28
Ldb1P70662 Gm13689-201ENSMUST00000119360 685 ntBASIC13.3□□□□□ -0.28
Ldb1P70662 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ldb1P70662 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Ldb1P70662 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.3□□□□□ -0.28
Ldb1P70662 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.3□□□□□ -0.28
Ldb1P70662 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.3□□□□□ -0.28
Ldb1P70662 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb1P70662 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Ldb1P70662 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Gm15678-201ENSMUST00000117573 960 ntBASIC13.29□□□□□ -0.28
Ldb1P70662 Gm12341-201ENSMUST00000119724 503 ntBASIC13.29□□□□□ -0.28
Ldb1P70662 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.29□□□□□ -0.28
Ldb1P70662 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.29□□□□□ -0.28
Ldb1P70662 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.29□□□□□ -0.28
Ldb1P70662 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Gm28631-201ENSMUST00000190740 334 ntBASIC13.29□□□□□ -0.28
Ldb1P70662 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.29□□□□□ -0.28
Ldb1P70662 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.29□□□□□ -0.28
Ldb1P70662 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ldb1P70662 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.29□□□□□ -0.28
Ldb1P70662 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.29□□□□□ -0.28
Ldb1P70662 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.29□□□□□ -0.28
Ldb1P70662 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.29□□□□□ -0.28
Ldb1P70662 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ldb1P70662 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms