Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx1P63006 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx1P63006 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.11□□□□□ -0.31
Lhx1P63006 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx1P63006 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx1P63006 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx1P63006 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx1P63006 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx1P63006 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx1P63006 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx1P63006 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Lhx1P63006 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx1P63006 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lhx1P63006 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.1□□□□□ -0.31
Lhx1P63006 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.1□□□□□ -0.31
Lhx1P63006 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
Lhx1P63006 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lhx1P63006 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Lhx1P63006 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lhx1P63006 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.1□□□□□ -0.31
Lhx1P63006 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.1□□□□□ -0.31
Lhx1P63006 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.1□□□□□ -0.31
Lhx1P63006 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Lhx1P63006 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Lhx1P63006 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.1□□□□□ -0.31
Lhx1P63006 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx1P63006 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lhx1P63006 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lhx1P63006 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.09□□□□□ -0.31
Lhx1P63006 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
Lhx1P63006 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Gm12384-201ENSMUST00000119228 919 ntBASIC13.09□□□□□ -0.31
Lhx1P63006 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.09□□□□□ -0.31
Lhx1P63006 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.09□□□□□ -0.31
Lhx1P63006 Gm4271-201ENSMUST00000174444 973 ntBASIC13.09□□□□□ -0.31
Lhx1P63006 Gm27731-201ENSMUST00000185192 107 ntBASIC13.09□□□□□ -0.31
Lhx1P63006 AY702102-202ENSMUST00000194651 1173 ntBASIC13.09□□□□□ -0.31
Lhx1P63006 Gm37497-201ENSMUST00000195830 798 ntBASIC13.09□□□□□ -0.31
Lhx1P63006 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.09□□□□□ -0.31
Lhx1P63006 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.09□□□□□ -0.31
Lhx1P63006 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.09□□□□□ -0.31
Lhx1P63006 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx1P63006 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lhx1P63006 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Lhx1P63006 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lhx1P63006 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lhx1P63006 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx1P63006 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx1P63006 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx1P63006 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms