Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.35□□□□□ -0.75
Pfn1P62962 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pfn1P62962 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Pfn1P62962 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pfn1P62962 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pfn1P62962 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC10.34□□□□□ -0.75
Pfn1P62962 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Pfn1P62962 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.34□□□□□ -0.75
Pfn1P62962 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.34□□□□□ -0.75
Pfn1P62962 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC10.34□□□□□ -0.75
Pfn1P62962 Gm6973-201ENSMUST00000117080 721 ntBASIC10.34□□□□□ -0.75
Pfn1P62962 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC10.34□□□□□ -0.75
Pfn1P62962 Rpph1-201ENSMUST00000175096 319 ntBASIC10.34□□□□□ -0.75
Pfn1P62962 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC10.34□□□□□ -0.75
Pfn1P62962 AC138767.1-201ENSMUST00000222661 415 ntBASIC10.34□□□□□ -0.75
Pfn1P62962 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC10.34□□□□□ -0.75
Pfn1P62962 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Pfn1P62962 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Pfn1P62962 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Pfn1P62962 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.34□□□□□ -0.75
Pfn1P62962 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Pfn1P62962 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Pfn1P62962 Gm8337-201ENSMUST00000187358 1938 ntBASIC10.34□□□□□ -0.75
Pfn1P62962 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Pfn1P62962 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.34□□□□□ -0.75
Pfn1P62962 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Pfn1P62962 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC10.34□□□□□ -0.75
Pfn1P62962 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.34□□□□□ -0.75
Pfn1P62962 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pfn1P62962 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Pfn1P62962 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Pfn1P62962 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Pfn1P62962 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.33□□□□□ -0.76
Pfn1P62962 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.33□□□□□ -0.76
Pfn1P62962 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.33□□□□□ -0.76
Pfn1P62962 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.33□□□□□ -0.76
Pfn1P62962 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC10.33□□□□□ -0.76
Pfn1P62962 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.33□□□□□ -0.76
Pfn1P62962 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC10.33□□□□□ -0.76
Pfn1P62962 Gm18733-201ENSMUST00000173950 856 ntBASIC10.33□□□□□ -0.76
Pfn1P62962 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC10.33□□□□□ -0.76
Pfn1P62962 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC10.33□□□□□ -0.76
Pfn1P62962 Gm17968-201ENSMUST00000194902 784 ntBASIC10.33□□□□□ -0.76
Pfn1P62962 Gm7229-201ENSMUST00000214719 1007 ntBASIC10.33□□□□□ -0.76
Pfn1P62962 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Pfn1P62962 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Pfn1P62962 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Pfn1P62962 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.33□□□□□ -0.76
Pfn1P62962 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.33□□□□□ -0.76
Pfn1P62962 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Pfn1P62962 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.33□□□□□ -0.76
Pfn1P62962 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms