Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.67□□□□□ -0.22
Ybx1P62960 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.67□□□□□ -0.22
Ybx1P62960 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.67□□□□□ -0.22
Ybx1P62960 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.67□□□□□ -0.22
Ybx1P62960 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ybx1P62960 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ybx1P62960 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.66□□□□□ -0.22
Ybx1P62960 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.66□□□□□ -0.22
Ybx1P62960 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ybx1P62960 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ybx1P62960 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ybx1P62960 Gm11591-201ENSMUST00000120063 702 ntBASIC13.66□□□□□ -0.22
Ybx1P62960 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ybx1P62960 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.66□□□□□ -0.22
Ybx1P62960 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.66□□□□□ -0.22
Ybx1P62960 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.66□□□□□ -0.22
Ybx1P62960 Gm44069-201ENSMUST00000204898 506 ntBASIC13.66□□□□□ -0.22
Ybx1P62960 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ybx1P62960 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ybx1P62960 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ybx1P62960 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ybx1P62960 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ybx1P62960 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ybx1P62960 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ybx1P62960 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ybx1P62960 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Ybx1P62960 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ybx1P62960 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ybx1P62960 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ybx1P62960 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ybx1P62960 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ybx1P62960 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ybx1P62960 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ybx1P62960 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ybx1P62960 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ybx1P62960 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ybx1P62960 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Ybx1P62960 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ybx1P62960 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.65□□□□□ -0.22
Ybx1P62960 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ybx1P62960 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.65□□□□□ -0.22
Ybx1P62960 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ybx1P62960 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ybx1P62960 Gm13786-201ENSMUST00000122371 333 ntBASIC13.65□□□□□ -0.22
Ybx1P62960 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ybx1P62960 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.65□□□□□ -0.22
Ybx1P62960 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.65□□□□□ -0.22
Ybx1P62960 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ybx1P62960 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.65□□□□□ -0.22
Ybx1P62960 Gm37259-201ENSMUST00000193903 849 ntBASIC13.65□□□□□ -0.22
Ybx1P62960 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.65□□□□□ -0.22
Ybx1P62960 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ybx1P62960 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ybx1P62960 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ybx1P62960 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ybx1P62960 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ybx1P62960 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ybx1P62960 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Ybx1P62960 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.65□□□□□ -0.22
Ybx1P62960 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ybx1P62960 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.65□□□□□ -0.23
Ybx1P62960 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ybx1P62960 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ybx1P62960 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.64□□□□□ -0.23
Ybx1P62960 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ybx1P62960 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ybx1P62960 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ybx1P62960 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ybx1P62960 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.64□□□□□ -0.23
Ybx1P62960 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.64□□□□□ -0.23
Ybx1P62960 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ybx1P62960 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ybx1P62960 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ybx1P62960 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ybx1P62960 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ybx1P62960 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.64□□□□□ -0.23
Ybx1P62960 Gm12241-201ENSMUST00000118330 726 ntBASIC13.64□□□□□ -0.23
Ybx1P62960 Gm15808-201ENSMUST00000119046 604 ntBASIC13.64□□□□□ -0.23
Ybx1P62960 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ybx1P62960 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.64□□□□□ -0.23
Ybx1P62960 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ybx1P62960 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ybx1P62960 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.64□□□□□ -0.23
Ybx1P62960 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.64□□□□□ -0.23
Ybx1P62960 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.64□□□□□ -0.23
Ybx1P62960 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.64□□□□□ -0.23
Ybx1P62960 Gm8227-201ENSMUST00000223306 571 ntBASIC13.64□□□□□ -0.23
Ybx1P62960 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.64□□□□□ -0.23
Ybx1P62960 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ybx1P62960 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.64□□□□□ -0.23
Ybx1P62960 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ybx1P62960 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.64□□□□□ -0.23
Ybx1P62960 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms