Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vbp1P61759 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vbp1P61759 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vbp1P61759 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vbp1P61759 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.09□□□□□ -0.47
Vbp1P61759 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.09□□□□□ -0.47
Vbp1P61759 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.09□□□□□ -0.47
Vbp1P61759 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.09□□□□□ -0.47
Vbp1P61759 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vbp1P61759 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vbp1P61759 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vbp1P61759 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vbp1P61759 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vbp1P61759 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vbp1P61759 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vbp1P61759 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Vbp1P61759 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Vbp1P61759 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Vbp1P61759 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vbp1P61759 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Vbp1P61759 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vbp1P61759 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vbp1P61759 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vbp1P61759 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Vbp1P61759 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Vbp1P61759 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Vbp1P61759 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vbp1P61759 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vbp1P61759 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vbp1P61759 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Vbp1P61759 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vbp1P61759 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vbp1P61759 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.08□□□□□ -0.48
Vbp1P61759 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vbp1P61759 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vbp1P61759 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.08□□□□□ -0.48
Vbp1P61759 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vbp1P61759 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vbp1P61759 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.08□□□□□ -0.48
Vbp1P61759 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vbp1P61759 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Vbp1P61759 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vbp1P61759 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vbp1P61759 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vbp1P61759 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vbp1P61759 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vbp1P61759 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Vbp1P61759 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.08□□□□□ -0.48
Vbp1P61759 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vbp1P61759 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vbp1P61759 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Vbp1P61759 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Vbp1P61759 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vbp1P61759 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Vbp1P61759 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vbp1P61759 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vbp1P61759 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.07□□□□□ -0.48
Vbp1P61759 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.07□□□□□ -0.48
Vbp1P61759 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Vbp1P61759 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Vbp1P61759 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.07□□□□□ -0.48
Vbp1P61759 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Mir874-201ENSMUST00000104769 76 ntBASIC12.07□□□□□ -0.48
Vbp1P61759 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Vbp1P61759 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.07□□□□□ -0.48
Vbp1P61759 Gm27301-201ENSMUST00000184012 127 ntBASIC12.07□□□□□ -0.48
Vbp1P61759 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.07□□□□□ -0.48
Vbp1P61759 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.07□□□□□ -0.48
Vbp1P61759 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.07□□□□□ -0.48
Vbp1P61759 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.07□□□□□ -0.48
Vbp1P61759 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.07□□□□□ -0.48
Vbp1P61759 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Vbp1P61759 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vbp1P61759 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms