Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm23936-201ENSMUST00000179354 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm22619-201ENSMUST00000179516 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm25255-201ENSMUST00000179579 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm24755-201ENSMUST00000179691 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm26506-201ENSMUST00000179692 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm25086-201ENSMUST00000179931 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm23243-201ENSMUST00000180047 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm24659-201ENSMUST00000180212 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm24169-201ENSMUST00000180244 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm23689-201ENSMUST00000180354 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm8927-201ENSMUST00000181978 981 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm27359-201ENSMUST00000184153 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm27785-201ENSMUST00000184268 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm27466-201ENSMUST00000184396 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm27703-201ENSMUST00000184836 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm3222-201ENSMUST00000071282 990 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3b6P59708 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3b6P59708 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3b6P59708 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3b6P59708 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Sf3b6P59708 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3b6P59708 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sf3b6P59708 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3b6P59708 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3b6P59708 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Sf3b6P59708 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3b6P59708 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3b6P59708 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.86□□□□□ -0.51
Sf3b6P59708 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sf3b6P59708 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.86□□□□□ -0.51
Sf3b6P59708 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Mir449b-201ENSMUST00000104833 80 ntBASIC11.86□□□□□ -0.51
Sf3b6P59708 Gm5566-201ENSMUST00000116118 459 ntBASIC11.86□□□□□ -0.51
Sf3b6P59708 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.86□□□□□ -0.51
Sf3b6P59708 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.86□□□□□ -0.51
Sf3b6P59708 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.86□□□□□ -0.51
Sf3b6P59708 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.86□□□□□ -0.51
Sf3b6P59708 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.86□□□□□ -0.51
Sf3b6P59708 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Sf3b6P59708 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Sf3b6P59708 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Sf3b6P59708 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.86□□□□□ -0.51
Sf3b6P59708 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3b6P59708 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.86□□□□□ -0.51
Sf3b6P59708 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sf3b6P59708 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Sf3b6P59708 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.85□□□□□ -0.51
Sf3b6P59708 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sf3b6P59708 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sf3b6P59708 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3b6P59708 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms