Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ctdsp1P58466 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ctdsp1P58466 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ctdsp1P58466 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ctdsp1P58466 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ctdsp1P58466 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ctdsp1P58466 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ctdsp1P58466 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ctdsp1P58466 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ctdsp1P58466 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ctdsp1P58466 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ctdsp1P58466 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ctdsp1P58466 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ctdsp1P58466 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Gm11780-201ENSMUST00000136880 516 ntBASIC10.38□□□□□ -0.75
Ctdsp1P58466 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Gm2272-201ENSMUST00000194903 582 ntBASIC10.38□□□□□ -0.75
Ctdsp1P58466 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.38□□□□□ -0.75
Ctdsp1P58466 Gm18032-201ENSMUST00000222541 538 ntBASIC10.38□□□□□ -0.75
Ctdsp1P58466 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ctdsp1P58466 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 CT025626.1-201ENSMUST00000223735 1455 ntBASIC10.37□□□□□ -0.75
Ctdsp1P58466 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Ctdsp1P58466 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC10.37□□□□□ -0.75
Ctdsp1P58466 Gm37584-201ENSMUST00000193595 1290 ntBASIC10.37□□□□□ -0.75
Ctdsp1P58466 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Rbfox2-207ENSMUST00000227533 1041 ntBASIC10.37□□□□□ -0.75
Ctdsp1P58466 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ctdsp1P58466 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms