Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.36□□□□□ -0.27
Fdft1P53798 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Fdft1P53798 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Fdft1P53798 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.36□□□□□ -0.27
Fdft1P53798 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Fdft1P53798 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Fdft1P53798 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Fdft1P53798 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Fdft1P53798 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Fdft1P53798 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fdft1P53798 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fdft1P53798 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fdft1P53798 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Fdft1P53798 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fdft1P53798 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fdft1P53798 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.35□□□□□ -0.27
Fdft1P53798 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fdft1P53798 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Fdft1P53798 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Fdft1P53798 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.35□□□□□ -0.27
Fdft1P53798 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Fdft1P53798 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.35□□□□□ -0.27
Fdft1P53798 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Fdft1P53798 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.35□□□□□ -0.27
Fdft1P53798 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.35□□□□□ -0.27
Fdft1P53798 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fdft1P53798 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fdft1P53798 Gm27772-201ENSMUST00000184900 187 ntBASIC13.35□□□□□ -0.27
Fdft1P53798 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.35□□□□□ -0.27
Fdft1P53798 Gm20949-201ENSMUST00000206478 952 ntBASIC13.35□□□□□ -0.27
Fdft1P53798 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.35□□□□□ -0.27
Fdft1P53798 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Fdft1P53798 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.35□□□□□ -0.27
Fdft1P53798 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fdft1P53798 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fdft1P53798 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Fdft1P53798 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.35□□□□□ -0.27
Fdft1P53798 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Fdft1P53798 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fdft1P53798 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fdft1P53798 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.35□□□□□ -0.27
Fdft1P53798 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fdft1P53798 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.34□□□□□ -0.27
Fdft1P53798 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.34□□□□□ -0.27
Fdft1P53798 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Fdft1P53798 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.34□□□□□ -0.27
Fdft1P53798 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Fdft1P53798 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Gm14719-201ENSMUST00000121891 340 ntBASIC13.34□□□□□ -0.27
Fdft1P53798 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.34□□□□□ -0.27
Fdft1P53798 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.34□□□□□ -0.27
Fdft1P53798 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.34□□□□□ -0.27
Fdft1P53798 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.34□□□□□ -0.27
Fdft1P53798 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Fdft1P53798 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.34□□□□□ -0.27
Fdft1P53798 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Fdft1P53798 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Fdft1P53798 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.34□□□□□ -0.27
Fdft1P53798 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fdft1P53798 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Fdft1P53798 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Fdft1P53798 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Fdft1P53798 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms