Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.65□□□□□ -0.38
RoraP51448 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RoraP51448 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
RoraP51448 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
RoraP51448 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
RoraP51448 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
RoraP51448 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
RoraP51448 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.64□□□□□ -0.39
RoraP51448 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RoraP51448 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RoraP51448 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.64□□□□□ -0.39
RoraP51448 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
RoraP51448 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.64□□□□□ -0.39
RoraP51448 Gm8213-201ENSMUST00000118191 441 ntBASIC12.64□□□□□ -0.39
RoraP51448 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
RoraP51448 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.64□□□□□ -0.39
RoraP51448 Gm8810-201ENSMUST00000172895 754 ntBASIC12.64□□□□□ -0.39
RoraP51448 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.64□□□□□ -0.39
RoraP51448 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.64□□□□□ -0.39
RoraP51448 Gm26315-201ENSMUST00000083890 321 ntBASIC12.64□□□□□ -0.39
RoraP51448 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RoraP51448 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RoraP51448 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RoraP51448 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.63□□□□□ -0.39
RoraP51448 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
RoraP51448 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RoraP51448 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
RoraP51448 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.63□□□□□ -0.39
RoraP51448 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Gm22331-201ENSMUST00000158066 136 ntBASIC12.63□□□□□ -0.39
RoraP51448 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.63□□□□□ -0.39
RoraP51448 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.63□□□□□ -0.39
RoraP51448 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
RoraP51448 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
RoraP51448 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
RoraP51448 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.63□□□□□ -0.39
RoraP51448 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RoraP51448 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RoraP51448 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.62□□□□□ -0.39
RoraP51448 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RoraP51448 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RoraP51448 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RoraP51448 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.62□□□□□ -0.39
RoraP51448 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.62□□□□□ -0.39
RoraP51448 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
RoraP51448 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
RoraP51448 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms