Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brca1P48754 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Brca1P48754 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brca1P48754 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brca1P48754 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brca1P48754 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brca1P48754 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brca1P48754 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Brca1P48754 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.69□□□□□ -0.06
Brca1P48754 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.69□□□□□ -0.06
Brca1P48754 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Brca1P48754 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Brca1P48754 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.69□□□□□ -0.06
Brca1P48754 Gm13296-201ENSMUST00000117854 997 ntBASIC14.69□□□□□ -0.06
Brca1P48754 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Brca1P48754 Gm8365-201ENSMUST00000197334 648 ntBASIC14.69□□□□□ -0.06
Brca1P48754 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.69□□□□□ -0.06
Brca1P48754 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.69□□□□□ -0.06
Brca1P48754 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Brca1P48754 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Brca1P48754 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Brca1P48754 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Brca1P48754 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.69□□□□□ -0.06
Brca1P48754 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.69□□□□□ -0.06
Brca1P48754 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.69□□□□□ -0.06
Brca1P48754 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.69□□□□□ -0.06
Brca1P48754 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.69□□□□□ -0.06
Brca1P48754 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.69□□□□□ -0.06
Brca1P48754 Gm45433-201ENSMUST00000209386 247 ntBASIC14.69□□□□□ -0.06
Brca1P48754 Gm7600-201ENSMUST00000209657 785 ntBASIC14.69□□□□□ -0.06
Brca1P48754 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.69□□□□□ -0.06
Brca1P48754 Gm18730-201ENSMUST00000218038 343 ntBASIC14.69□□□□□ -0.06
Brca1P48754 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Brca1P48754 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.68□□□□□ -0.06
Brca1P48754 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.68□□□□□ -0.06
Brca1P48754 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Brca1P48754 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Brca1P48754 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Brca1P48754 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.68□□□□□ -0.06
Brca1P48754 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.68□□□□□ -0.06
Brca1P48754 Gm5070-201ENSMUST00000177599 862 ntBASIC14.68□□□□□ -0.06
Brca1P48754 Gm37666-201ENSMUST00000194110 866 ntBASIC14.68□□□□□ -0.06
Brca1P48754 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.68□□□□□ -0.06
Brca1P48754 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.68□□□□□ -0.06
Brca1P48754 Gm10752-201ENSMUST00000218348 729 ntBASIC14.68□□□□□ -0.06
Brca1P48754 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.68□□□□□ -0.06
Brca1P48754 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.68□□□□□ -0.06
Brca1P48754 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Brca1P48754 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Brca1P48754 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Brca1P48754 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Brca1P48754 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brca1P48754 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brca1P48754 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms