Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps4bP46467 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps4bP46467 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps4bP46467 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps4bP46467 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Vps4bP46467 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps4bP46467 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.58□□□□□ -0.24
Vps4bP46467 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps4bP46467 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps4bP46467 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps4bP46467 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps4bP46467 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps4bP46467 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps4bP46467 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps4bP46467 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps4bP46467 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps4bP46467 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.57□□□□□ -0.24
Vps4bP46467 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps4bP46467 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.57□□□□□ -0.24
Vps4bP46467 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.57□□□□□ -0.24
Vps4bP46467 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Vps4bP46467 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Vps4bP46467 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps4bP46467 Mir7684-201ENSMUST00000183858 60 ntBASIC13.57□□□□□ -0.24
Vps4bP46467 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.57□□□□□ -0.24
Vps4bP46467 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.57□□□□□ -0.24
Vps4bP46467 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps4bP46467 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps4bP46467 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps4bP46467 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.57□□□□□ -0.24
Vps4bP46467 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps4bP46467 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps4bP46467 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps4bP46467 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps4bP46467 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps4bP46467 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Vps4bP46467 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Vps4bP46467 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps4bP46467 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps4bP46467 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps4bP46467 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps4bP46467 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps4bP46467 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps4bP46467 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Vps4bP46467 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vps4bP46467 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.56□□□□□ -0.24
Vps4bP46467 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.56□□□□□ -0.24
Vps4bP46467 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.56□□□□□ -0.24
Vps4bP46467 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.56□□□□□ -0.24
Vps4bP46467 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.56□□□□□ -0.24
Vps4bP46467 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.56□□□□□ -0.24
Vps4bP46467 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.56□□□□□ -0.24
Vps4bP46467 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.56□□□□□ -0.24
Vps4bP46467 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Vps4bP46467 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Vps4bP46467 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.56□□□□□ -0.24
Vps4bP46467 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.56□□□□□ -0.24
Vps4bP46467 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.56□□□□□ -0.24
Vps4bP46467 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps4bP46467 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vps4bP46467 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vps4bP46467 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Vps4bP46467 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.55□□□□□ -0.24
Vps4bP46467 Gm2423-201ENSMUST00000074863 733 ntBASIC13.55□□□□□ -0.24
Vps4bP46467 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms