Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Gm14701-201ENSMUST00000117156 348 ntBASIC12.91□□□□□ -0.34
Tnfsf4P43488 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Gm26308-201ENSMUST00000157768 69 ntBASIC12.91□□□□□ -0.34
Tnfsf4P43488 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.9□□□□□ -0.34
Tnfsf4P43488 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.9□□□□□ -0.34
Tnfsf4P43488 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.9□□□□□ -0.34
Tnfsf4P43488 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf4P43488 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Gm17837-201ENSMUST00000186435 985 ntBASIC12.9□□□□□ -0.34
Tnfsf4P43488 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.9□□□□□ -0.34
Tnfsf4P43488 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Tnfsf4P43488 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.9□□□□□ -0.34
Tnfsf4P43488 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Tnfsf4P43488 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Tnfsf4P43488 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Tnfsf4P43488 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Tnfsf4P43488 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.89□□□□□ -0.35
Tnfsf4P43488 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Gm23935-201ENSMUST00000102303 57 ntBASIC12.89□□□□□ -0.35
Tnfsf4P43488 Gm24270-201ENSMUST00000102326 57 ntBASIC12.89□□□□□ -0.35
Tnfsf4P43488 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Gm13453-201ENSMUST00000118708 357 ntBASIC12.89□□□□□ -0.35
Tnfsf4P43488 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Gm24245-201ENSMUST00000157318 57 ntBASIC12.89□□□□□ -0.35
Tnfsf4P43488 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Gm17330-201ENSMUST00000221047 165 ntBASIC12.89□□□□□ -0.35
Tnfsf4P43488 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms