Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx2P43241 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdx2P43241 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx2P43241 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx2P43241 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdx2P43241 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx2P43241 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx2P43241 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx2P43241 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx2P43241 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx2P43241 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx2P43241 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx2P43241 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx2P43241 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.64□□□□□ -0.39
Cdx2P43241 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdx2P43241 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.63□□□□□ -0.39
Cdx2P43241 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cdx2P43241 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.63□□□□□ -0.39
Cdx2P43241 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdx2P43241 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.63□□□□□ -0.39
Cdx2P43241 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.63□□□□□ -0.39
Cdx2P43241 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdx2P43241 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.63□□□□□ -0.39
Cdx2P43241 Gm6458-201ENSMUST00000211573 635 ntBASIC12.63□□□□□ -0.39
Cdx2P43241 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.63□□□□□ -0.39
Cdx2P43241 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cdx2P43241 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.63□□□□□ -0.39
Cdx2P43241 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cdx2P43241 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cdx2P43241 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Cdx2P43241 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.63□□□□□ -0.39
Cdx2P43241 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cdx2P43241 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Cdx2P43241 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx2P43241 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdx2P43241 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cdx2P43241 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Cdx2P43241 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.62□□□□□ -0.39
Cdx2P43241 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cdx2P43241 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.62□□□□□ -0.39
Cdx2P43241 Gm12502-201ENSMUST00000120197 444 ntBASIC12.62□□□□□ -0.39
Cdx2P43241 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.62□□□□□ -0.39
Cdx2P43241 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.62□□□□□ -0.39
Cdx2P43241 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdx2P43241 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cdx2P43241 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdx2P43241 Gm16505-201ENSMUST00000179981 232 ntBASIC12.62□□□□□ -0.39
Cdx2P43241 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Gm30285-201ENSMUST00000214614 422 ntBASIC12.62□□□□□ -0.39
Cdx2P43241 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdx2P43241 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.62□□□□□ -0.39
Cdx2P43241 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cdx2P43241 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cdx2P43241 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms