Protein–RNA interactions for Protein: P41778

Pbx1, Pre-B-cell leukemia transcription factor 1, mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx1P41778 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pbx1P41778 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pbx1P41778 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Pbx1P41778 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pbx1P41778 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pbx1P41778 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pbx1P41778 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.38□□□□□ -0.11
Pbx1P41778 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.38□□□□□ -0.11
Pbx1P41778 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pbx1P41778 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.38□□□□□ -0.11
Pbx1P41778 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pbx1P41778 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pbx1P41778 Gm26308-201ENSMUST00000157768 69 ntBASIC14.38□□□□□ -0.11
Pbx1P41778 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pbx1P41778 Gm9522-201ENSMUST00000182394 926 ntBASIC14.38□□□□□ -0.11
Pbx1P41778 Gm27306-201ENSMUST00000183970 107 ntBASIC14.38□□□□□ -0.11
Pbx1P41778 Gm43575-201ENSMUST00000196420 516 ntBASIC14.38□□□□□ -0.11
Pbx1P41778 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pbx1P41778 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.38□□□□□ -0.11
Pbx1P41778 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Pbx1P41778 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.38□□□□□ -0.11
Pbx1P41778 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pbx1P41778 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pbx1P41778 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pbx1P41778 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pbx1P41778 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.38□□□□□ -0.11
Pbx1P41778 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pbx1P41778 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pbx1P41778 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pbx1P41778 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pbx1P41778 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.38□□□□□ -0.11
Pbx1P41778 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pbx1P41778 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.38□□□□□ -0.11
Pbx1P41778 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Pbx1P41778 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.37□□□□□ -0.11
Pbx1P41778 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.37□□□□□ -0.11
Pbx1P41778 Gm19078-201ENSMUST00000206311 727 ntBASIC14.37□□□□□ -0.11
Pbx1P41778 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pbx1P41778 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pbx1P41778 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.37□□□□□ -0.11
Pbx1P41778 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Pbx1P41778 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.36□□□□□ -0.11
Pbx1P41778 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Pbx1P41778 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pbx1P41778 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
Pbx1P41778 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.36□□□□□ -0.11
Pbx1P41778 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Pbx1P41778 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.36□□□□□ -0.11
Pbx1P41778 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.36□□□□□ -0.11
Pbx1P41778 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Pbx1P41778 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pbx1P41778 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pbx1P41778 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pbx1P41778 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms