Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC17.26■□□□□ 0.35
Col18a1P39061 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col18a1P39061 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col18a1P39061 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col18a1P39061 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col18a1P39061 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col18a1P39061 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col18a1P39061 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col18a1P39061 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Col18a1P39061 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col18a1P39061 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Col18a1P39061 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col18a1P39061 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Col18a1P39061 Gm23596-201ENSMUST00000104304 132 ntBASIC17.25■□□□□ 0.35
Col18a1P39061 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
Col18a1P39061 Gm11989-201ENSMUST00000117240 672 ntBASIC17.25■□□□□ 0.35
Col18a1P39061 Gm11362-201ENSMUST00000118838 850 ntBASIC17.25■□□□□ 0.35
Col18a1P39061 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC17.25■□□□□ 0.35
Col18a1P39061 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col18a1P39061 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC17.25■□□□□ 0.35
Col18a1P39061 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC17.25■□□□□ 0.35
Col18a1P39061 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC17.25■□□□□ 0.35
Col18a1P39061 Gm9785-201ENSMUST00000062642 1006 ntBASIC17.25■□□□□ 0.35
Col18a1P39061 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col18a1P39061 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col18a1P39061 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col18a1P39061 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col18a1P39061 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Col18a1P39061 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Col18a1P39061 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col18a1P39061 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col18a1P39061 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Col18a1P39061 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col18a1P39061 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Col18a1P39061 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC17.25■□□□□ 0.35
Col18a1P39061 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col18a1P39061 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Col18a1P39061 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Col18a1P39061 Gm43520-201ENSMUST00000197996 164 ntBASIC17.25■□□□□ 0.35
Col18a1P39061 Gm2517-201ENSMUST00000215651 348 ntBASIC17.25■□□□□ 0.35
Col18a1P39061 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC17.25■□□□□ 0.35
Col18a1P39061 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC17.25■□□□□ 0.35
Col18a1P39061 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Col18a1P39061 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col18a1P39061 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col18a1P39061 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Col18a1P39061 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Col18a1P39061 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col18a1P39061 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col18a1P39061 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col18a1P39061 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Col18a1P39061 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col18a1P39061 Gm15595-201ENSMUST00000120840 961 ntBASIC17.24■□□□□ 0.35
Col18a1P39061 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col18a1P39061 Gm22144-201ENSMUST00000157402 102 ntBASIC17.24■□□□□ 0.35
Col18a1P39061 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC17.24■□□□□ 0.35
Col18a1P39061 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col18a1P39061 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col18a1P39061 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.24■□□□□ 0.35
Col18a1P39061 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Col18a1P39061 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col18a1P39061 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col18a1P39061 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col18a1P39061 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Col18a1P39061 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC17.23■□□□□ 0.35
Col18a1P39061 Gm13809-201ENSMUST00000117921 597 ntBASIC17.23■□□□□ 0.35
Col18a1P39061 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC17.23■□□□□ 0.35
Col18a1P39061 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 Gm19931-201ENSMUST00000198920 368 ntBASIC17.23■□□□□ 0.35
Col18a1P39061 AC154290.1-201ENSMUST00000223786 1240 ntBASIC17.23■□□□□ 0.35
Col18a1P39061 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Col18a1P39061 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC17.23■□□□□ 0.35
Col18a1P39061 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 Gm25545-201ENSMUST00000122673 323 ntBASIC17.23■□□□□ 0.35
Col18a1P39061 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC17.23■□□□□ 0.35
Col18a1P39061 Gm3793-201ENSMUST00000204973 672 ntBASIC17.23■□□□□ 0.35
Col18a1P39061 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col18a1P39061 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col18a1P39061 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col18a1P39061 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col18a1P39061 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms