Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp13P33435 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Mmp13P33435 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Mmp13P33435 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.69□□□□□ -0.22
Mmp13P33435 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp13P33435 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp13P33435 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Mmp13P33435 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.69□□□□□ -0.22
Mmp13P33435 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Mmp13P33435 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp13P33435 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.69□□□□□ -0.22
Mmp13P33435 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp13P33435 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Mmp13P33435 Gm15321-201ENSMUST00000121290 288 ntBASIC13.69□□□□□ -0.22
Mmp13P33435 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.69□□□□□ -0.22
Mmp13P33435 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.69□□□□□ -0.22
Mmp13P33435 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Mmp13P33435 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.69□□□□□ -0.22
Mmp13P33435 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Mmp13P33435 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp13P33435 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp13P33435 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp13P33435 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp13P33435 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp13P33435 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp13P33435 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp13P33435 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp13P33435 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.69□□□□□ -0.22
Mmp13P33435 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp13P33435 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Mmp13P33435 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.69□□□□□ -0.22
Mmp13P33435 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp13P33435 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp13P33435 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Mmp13P33435 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.68□□□□□ -0.22
Mmp13P33435 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.68□□□□□ -0.22
Mmp13P33435 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Mmp13P33435 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Mmp13P33435 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Mmp13P33435 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Mmp13P33435 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.68□□□□□ -0.22
Mmp13P33435 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.68□□□□□ -0.22
Mmp13P33435 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.68□□□□□ -0.22
Mmp13P33435 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Mmp13P33435 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.68□□□□□ -0.22
Mmp13P33435 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.68□□□□□ -0.22
Mmp13P33435 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Mmp13P33435 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.68□□□□□ -0.22
Mmp13P33435 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp13P33435 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.67□□□□□ -0.22
Mmp13P33435 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Mmp13P33435 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Mmp13P33435 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Mmp13P33435 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 Gm7488-201ENSMUST00000117148 684 ntBASIC13.67□□□□□ -0.22
Mmp13P33435 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Mmp13P33435 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.67□□□□□ -0.22
Mmp13P33435 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.67□□□□□ -0.22
Mmp13P33435 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Mmp13P33435 Gm4804-201ENSMUST00000182234 999 ntBASIC13.67□□□□□ -0.22
Mmp13P33435 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Mmp13P33435 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Mmp13P33435 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.67□□□□□ -0.22
Mmp13P33435 Gm6218-201ENSMUST00000219812 628 ntBASIC13.67□□□□□ -0.22
Mmp13P33435 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms