Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.5□□□□□ -0.57
Slc6a1P31648 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a1P31648 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a1P31648 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a1P31648 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a1P31648 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.5□□□□□ -0.57
Slc6a1P31648 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Slc6a1P31648 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.49□□□□□ -0.57
Slc6a1P31648 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.49□□□□□ -0.57
Slc6a1P31648 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Slc6a1P31648 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 Gm27430-201ENSMUST00000184585 107 ntBASIC11.49□□□□□ -0.57
Slc6a1P31648 Gm44333-201ENSMUST00000197168 107 ntBASIC11.49□□□□□ -0.57
Slc6a1P31648 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.49□□□□□ -0.57
Slc6a1P31648 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Slc6a1P31648 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.49□□□□□ -0.57
Slc6a1P31648 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Slc6a1P31648 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Slc6a1P31648 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.49□□□□□ -0.57
Slc6a1P31648 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Slc6a1P31648 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Slc6a1P31648 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a1P31648 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.49□□□□□ -0.57
Slc6a1P31648 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Slc6a1P31648 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Slc6a1P31648 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Slc6a1P31648 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.48□□□□□ -0.57
Slc6a1P31648 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Gm13365-201ENSMUST00000121188 973 ntBASIC11.48□□□□□ -0.57
Slc6a1P31648 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.48□□□□□ -0.57
Slc6a1P31648 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Slc6a1P31648 Gm10253-201ENSMUST00000194270 940 ntBASIC11.48□□□□□ -0.57
Slc6a1P31648 Gm44335-201ENSMUST00000196879 141 ntBASIC11.48□□□□□ -0.57
Slc6a1P31648 Gm44297-201ENSMUST00000198304 141 ntBASIC11.48□□□□□ -0.57
Slc6a1P31648 Gm44346-201ENSMUST00000198851 141 ntBASIC11.48□□□□□ -0.57
Slc6a1P31648 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.48□□□□□ -0.57
Slc6a1P31648 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.48□□□□□ -0.57
Slc6a1P31648 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.48□□□□□ -0.57
Slc6a1P31648 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Slc6a1P31648 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.48□□□□□ -0.57
Slc6a1P31648 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Slc6a1P31648 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Slc6a1P31648 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.48□□□□□ -0.57
Slc6a1P31648 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Slc6a1P31648 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a1P31648 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.47□□□□□ -0.57
Slc6a1P31648 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a1P31648 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms