Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
Vcam1P29533 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vcam1P29533 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vcam1P29533 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vcam1P29533 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vcam1P29533 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcam1P29533 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Vcam1P29533 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
Vcam1P29533 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.26■□□□□ 0.03
Vcam1P29533 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcam1P29533 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Vcam1P29533 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcam1P29533 Gm24255-201ENSMUST00000104481 128 ntBASIC15.26■□□□□ 0.03
Vcam1P29533 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcam1P29533 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcam1P29533 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.26■□□□□ 0.03
Vcam1P29533 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.26■□□□□ 0.03
Vcam1P29533 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.26■□□□□ 0.03
Vcam1P29533 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.26■□□□□ 0.03
Vcam1P29533 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcam1P29533 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Vcam1P29533 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcam1P29533 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcam1P29533 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vcam1P29533 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcam1P29533 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcam1P29533 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcam1P29533 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcam1P29533 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.26■□□□□ 0.03
Vcam1P29533 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcam1P29533 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Vcam1P29533 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Vcam1P29533 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcam1P29533 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vcam1P29533 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.25■□□□□ 0.03
Vcam1P29533 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.25■□□□□ 0.03
Vcam1P29533 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.25■□□□□ 0.03
Vcam1P29533 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.25■□□□□ 0.03
Vcam1P29533 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Vcam1P29533 Gm37489-201ENSMUST00000191883 159 ntBASIC15.25■□□□□ 0.03
Vcam1P29533 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Vcam1P29533 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Vcam1P29533 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vcam1P29533 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcam1P29533 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vcam1P29533 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Vcam1P29533 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcam1P29533 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcam1P29533 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vcam1P29533 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcam1P29533 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.24■□□□□ 0.03
Vcam1P29533 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.24■□□□□ 0.03
Vcam1P29533 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vcam1P29533 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Vcam1P29533 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Vcam1P29533 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.24■□□□□ 0.03
Vcam1P29533 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.24■□□□□ 0.03
Vcam1P29533 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC15.24■□□□□ 0.03
Vcam1P29533 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC15.24■□□□□ 0.03
Vcam1P29533 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vcam1P29533 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcam1P29533 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcam1P29533 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcam1P29533 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
Vcam1P29533 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.24■□□□□ 0.03
Vcam1P29533 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcam1P29533 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcam1P29533 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcam1P29533 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcam1P29533 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Vcam1P29533 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.23■□□□□ 0.03
Vcam1P29533 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcam1P29533 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Vcam1P29533 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.23■□□□□ 0.03
Vcam1P29533 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.23■□□□□ 0.03
Vcam1P29533 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcam1P29533 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcam1P29533 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Vcam1P29533 Gm14704-201ENSMUST00000120300 874 ntBASIC15.23■□□□□ 0.03
Vcam1P29533 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms