Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.72□□□□□ -0.21
Nfkb1P25799 Gm42693-201ENSMUST00000196779 631 ntBASIC13.72□□□□□ -0.21
Nfkb1P25799 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nfkb1P25799 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.72□□□□□ -0.21
Nfkb1P25799 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nfkb1P25799 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.72□□□□□ -0.21
Nfkb1P25799 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nfkb1P25799 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Nfkb1P25799 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nfkb1P25799 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nfkb1P25799 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nfkb1P25799 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nfkb1P25799 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Nfkb1P25799 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.72□□□□□ -0.21
Nfkb1P25799 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.72□□□□□ -0.21
Nfkb1P25799 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.72□□□□□ -0.21
Nfkb1P25799 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nfkb1P25799 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nfkb1P25799 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nfkb1P25799 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nfkb1P25799 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Nfkb1P25799 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.71□□□□□ -0.21
Nfkb1P25799 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nfkb1P25799 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nfkb1P25799 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nfkb1P25799 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nfkb1P25799 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.71□□□□□ -0.21
Nfkb1P25799 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nfkb1P25799 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.71□□□□□ -0.21
Nfkb1P25799 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nfkb1P25799 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nfkb1P25799 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.71□□□□□ -0.21
Nfkb1P25799 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nfkb1P25799 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nfkb1P25799 Gm14350-201ENSMUST00000116642 640 ntBASIC13.71□□□□□ -0.21
Nfkb1P25799 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.71□□□□□ -0.21
Nfkb1P25799 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Nfkb1P25799 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nfkb1P25799 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Nfkb1P25799 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.71□□□□□ -0.21
Nfkb1P25799 Gm5370-201ENSMUST00000187187 574 ntBASIC13.71□□□□□ -0.21
Nfkb1P25799 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.71□□□□□ -0.21
Nfkb1P25799 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.71□□□□□ -0.21
Nfkb1P25799 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nfkb1P25799 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nfkb1P25799 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Nfkb1P25799 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Nfkb1P25799 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.71□□□□□ -0.21
Nfkb1P25799 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nfkb1P25799 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Nfkb1P25799 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.71□□□□□ -0.22
Nfkb1P25799 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.22
Nfkb1P25799 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nfkb1P25799 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nfkb1P25799 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.71□□□□□ -0.22
Nfkb1P25799 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.71□□□□□ -0.22
Nfkb1P25799 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.7□□□□□ -0.22
Nfkb1P25799 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nfkb1P25799 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nfkb1P25799 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nfkb1P25799 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.7□□□□□ -0.22
Nfkb1P25799 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.7□□□□□ -0.22
Nfkb1P25799 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.7□□□□□ -0.22
Nfkb1P25799 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.7□□□□□ -0.22
Nfkb1P25799 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Nfkb1P25799 Gm27514-201ENSMUST00000183692 110 ntBASIC13.7□□□□□ -0.22
Nfkb1P25799 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.7□□□□□ -0.22
Nfkb1P25799 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.7□□□□□ -0.22
Nfkb1P25799 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.7□□□□□ -0.22
Nfkb1P25799 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nfkb1P25799 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.7□□□□□ -0.22
Nfkb1P25799 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Nfkb1P25799 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nfkb1P25799 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nfkb1P25799 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nfkb1P25799 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nfkb1P25799 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.69□□□□□ -0.22
Nfkb1P25799 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nfkb1P25799 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.69□□□□□ -0.22
Nfkb1P25799 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms