Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
Cbx3P23198 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Cbx3P23198 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cbx3P23198 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Cbx3P23198 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cbx3P23198 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 Gm7862-201ENSMUST00000121461 292 ntBASIC12.15□□□□□ -0.46
Cbx3P23198 Gm11452-201ENSMUST00000122376 690 ntBASIC12.15□□□□□ -0.46
Cbx3P23198 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cbx3P23198 Gm5682-201ENSMUST00000173402 505 ntBASIC12.15□□□□□ -0.46
Cbx3P23198 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.15□□□□□ -0.46
Cbx3P23198 Gm10060-201ENSMUST00000212002 111 ntBASIC12.15□□□□□ -0.46
Cbx3P23198 Gm18246-201ENSMUST00000221023 728 ntBASIC12.15□□□□□ -0.46
Cbx3P23198 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.15□□□□□ -0.46
Cbx3P23198 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cbx3P23198 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Cbx3P23198 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cbx3P23198 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cbx3P23198 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cbx3P23198 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cbx3P23198 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Cbx3P23198 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
Cbx3P23198 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.14□□□□□ -0.47
Cbx3P23198 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cbx3P23198 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cbx3P23198 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.14□□□□□ -0.47
Cbx3P23198 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.14□□□□□ -0.47
Cbx3P23198 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cbx3P23198 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cbx3P23198 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cbx3P23198 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.14□□□□□ -0.47
Cbx3P23198 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cbx3P23198 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cbx3P23198 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.14□□□□□ -0.47
Cbx3P23198 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cbx3P23198 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cbx3P23198 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cbx3P23198 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cbx3P23198 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cbx3P23198 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cbx3P23198 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cbx3P23198 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cbx3P23198 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cbx3P23198 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.13□□□□□ -0.47
Cbx3P23198 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.13□□□□□ -0.47
Cbx3P23198 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.13□□□□□ -0.47
Cbx3P23198 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.13□□□□□ -0.47
Cbx3P23198 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cbx3P23198 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms