Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Clk1P22518 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Clk1P22518 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Clk1P22518 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Clk1P22518 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.51□□□□□ -0.41
Clk1P22518 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clk1P22518 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Gm15240-201ENSMUST00000118156 720 ntBASIC12.51□□□□□ -0.41
Clk1P22518 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Gm14057-201ENSMUST00000120631 482 ntBASIC12.51□□□□□ -0.41
Clk1P22518 Gm14719-201ENSMUST00000121891 340 ntBASIC12.51□□□□□ -0.41
Clk1P22518 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.51□□□□□ -0.41
Clk1P22518 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.51□□□□□ -0.41
Clk1P22518 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.51□□□□□ -0.41
Clk1P22518 Gm18041-201ENSMUST00000218210 618 ntBASIC12.51□□□□□ -0.41
Clk1P22518 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.51□□□□□ -0.41
Clk1P22518 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Clk1P22518 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Clk1P22518 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Clk1P22518 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.51□□□□□ -0.41
Clk1P22518 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clk1P22518 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.51□□□□□ -0.41
Clk1P22518 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.51□□□□□ -0.41
Clk1P22518 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Clk1P22518 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clk1P22518 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.51□□□□□ -0.41
Clk1P22518 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Clk1P22518 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.5□□□□□ -0.41
Clk1P22518 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Clk1P22518 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.5□□□□□ -0.41
Clk1P22518 Gm21854-201ENSMUST00000179901 471 ntBASIC12.5□□□□□ -0.41
Clk1P22518 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.5□□□□□ -0.41
Clk1P22518 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Gm20445-201ENSMUST00000061905 565 ntBASIC12.5□□□□□ -0.41
Clk1P22518 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.5□□□□□ -0.41
Clk1P22518 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.5□□□□□ -0.41
Clk1P22518 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.5□□□□□ -0.41
Clk1P22518 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms