Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cntn1P12960 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.82□□□□□ -0.36
Cntn1P12960 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Cntn1P12960 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cntn1P12960 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Mir1982-201ENSMUST00000157368 74 ntBASIC12.81□□□□□ -0.36
Cntn1P12960 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Gm8810-201ENSMUST00000172895 754 ntBASIC12.81□□□□□ -0.36
Cntn1P12960 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Gm29649-201ENSMUST00000185649 419 ntBASIC12.81□□□□□ -0.36
Cntn1P12960 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.81□□□□□ -0.36
Cntn1P12960 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.81□□□□□ -0.36
Cntn1P12960 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.81□□□□□ -0.36
Cntn1P12960 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cntn1P12960 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Cntn1P12960 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.81□□□□□ -0.36
Cntn1P12960 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.81□□□□□ -0.36
Cntn1P12960 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn1P12960 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cntn1P12960 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cntn1P12960 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.8□□□□□ -0.36
Cntn1P12960 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.8□□□□□ -0.36
Cntn1P12960 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cntn1P12960 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.8□□□□□ -0.36
Cntn1P12960 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn1P12960 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cntn1P12960 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cntn1P12960 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.79□□□□□ -0.36
Cntn1P12960 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Cntn1P12960 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.79□□□□□ -0.36
Cntn1P12960 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn1P12960 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms