Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa4P06798 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa4P06798 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Hoxa4P06798 Matn2-206ENSMUST00000228570 2798 ntBASIC13.13□□□□□ -0.31
Hoxa4P06798 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa4P06798 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa4P06798 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.13□□□□□ -0.31
Hoxa4P06798 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa4P06798 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa4P06798 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa4P06798 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.13□□□□□ -0.31
Hoxa4P06798 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Hoxa4P06798 Gm12390-201ENSMUST00000117897 397 ntBASIC13.13□□□□□ -0.31
Hoxa4P06798 Gm22331-201ENSMUST00000158066 136 ntBASIC13.13□□□□□ -0.31
Hoxa4P06798 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.13□□□□□ -0.31
Hoxa4P06798 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.13□□□□□ -0.31
Hoxa4P06798 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa4P06798 Gm29127-201ENSMUST00000188304 517 ntBASIC13.13□□□□□ -0.31
Hoxa4P06798 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa4P06798 Gm37922-201ENSMUST00000195596 455 ntBASIC13.13□□□□□ -0.31
Hoxa4P06798 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa4P06798 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.13□□□□□ -0.31
Hoxa4P06798 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.13□□□□□ -0.31
Hoxa4P06798 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.13□□□□□ -0.31
Hoxa4P06798 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa4P06798 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa4P06798 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Hoxa4P06798 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa4P06798 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hoxa4P06798 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Hoxa4P06798 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa4P06798 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa4P06798 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa4P06798 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Hoxa4P06798 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa4P06798 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa4P06798 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa4P06798 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa4P06798 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa4P06798 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa4P06798 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa4P06798 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa4P06798 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Hoxa4P06798 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa4P06798 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Hoxa4P06798 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.12□□□□□ -0.31
Hoxa4P06798 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.12□□□□□ -0.31
Hoxa4P06798 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.12□□□□□ -0.31
Hoxa4P06798 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.12□□□□□ -0.31
Hoxa4P06798 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa4P06798 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Hoxa4P06798 Gm43433-201ENSMUST00000196573 481 ntBASIC13.12□□□□□ -0.31
Hoxa4P06798 Gm43438-201ENSMUST00000198133 379 ntBASIC13.12□□□□□ -0.31
Hoxa4P06798 Gm19931-201ENSMUST00000198920 368 ntBASIC13.12□□□□□ -0.31
Hoxa4P06798 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa4P06798 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa4P06798 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa4P06798 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Hoxa4P06798 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa4P06798 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Hoxa4P06798 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa4P06798 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Hoxa4P06798 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa4P06798 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa4P06798 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa4P06798 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxa4P06798 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.11□□□□□ -0.31
Hoxa4P06798 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Hoxa4P06798 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.11□□□□□ -0.31
Hoxa4P06798 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.11□□□□□ -0.31
Hoxa4P06798 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Hoxa4P06798 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.11□□□□□ -0.31
Hoxa4P06798 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.11□□□□□ -0.31
Hoxa4P06798 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.11□□□□□ -0.31
Hoxa4P06798 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Hoxa4P06798 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 Gm27331-201ENSMUST00000183705 60 ntBASIC13.11□□□□□ -0.31
Hoxa4P06798 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.11□□□□□ -0.31
Hoxa4P06798 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.11□□□□□ -0.31
Hoxa4P06798 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxa4P06798 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.11□□□□□ -0.31
Hoxa4P06798 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms