Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PrnpP04925 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PrnpP04925 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.77□□□□□ -0.21
PrnpP04925 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PrnpP04925 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PrnpP04925 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PrnpP04925 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PrnpP04925 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PrnpP04925 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PrnpP04925 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PrnpP04925 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PrnpP04925 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.76□□□□□ -0.21
PrnpP04925 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.76□□□□□ -0.21
PrnpP04925 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.76□□□□□ -0.21
PrnpP04925 Gm26461-201ENSMUST00000175064 290 ntBASIC13.76□□□□□ -0.21
PrnpP04925 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.76□□□□□ -0.21
PrnpP04925 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.76□□□□□ -0.21
PrnpP04925 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.76□□□□□ -0.21
PrnpP04925 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
PrnpP04925 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PrnpP04925 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PrnpP04925 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PrnpP04925 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.75□□□□□ -0.21
PrnpP04925 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
PrnpP04925 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.75□□□□□ -0.21
PrnpP04925 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.75□□□□□ -0.21
PrnpP04925 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.75□□□□□ -0.21
PrnpP04925 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.75□□□□□ -0.21
PrnpP04925 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PrnpP04925 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.75□□□□□ -0.21
PrnpP04925 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PrnpP04925 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PrnpP04925 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.75□□□□□ -0.21
PrnpP04925 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
PrnpP04925 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PrnpP04925 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PrnpP04925 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PrnpP04925 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PrnpP04925 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.74□□□□□ -0.21
PrnpP04925 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PrnpP04925 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PrnpP04925 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PrnpP04925 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.74□□□□□ -0.21
PrnpP04925 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PrnpP04925 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PrnpP04925 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PrnpP04925 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PrnpP04925 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
PrnpP04925 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.74□□□□□ -0.21
PrnpP04925 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
PrnpP04925 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.74□□□□□ -0.21
PrnpP04925 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
PrnpP04925 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms