Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.15□□□□□ -0.62
CfdP03953 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
CfdP03953 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
CfdP03953 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.15□□□□□ -0.62
CfdP03953 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.15□□□□□ -0.62
CfdP03953 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.15□□□□□ -0.62
CfdP03953 Gm28659-201ENSMUST00000188013 759 ntBASIC11.15□□□□□ -0.62
CfdP03953 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.15□□□□□ -0.62
CfdP03953 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.15□□□□□ -0.62
CfdP03953 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
CfdP03953 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
CfdP03953 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.15□□□□□ -0.62
CfdP03953 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.15□□□□□ -0.62
CfdP03953 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.15□□□□□ -0.62
CfdP03953 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.15□□□□□ -0.62
CfdP03953 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.15□□□□□ -0.62
CfdP03953 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
CfdP03953 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
CfdP03953 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.14□□□□□ -0.63
CfdP03953 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
CfdP03953 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
CfdP03953 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.14□□□□□ -0.63
CfdP03953 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.14□□□□□ -0.63
CfdP03953 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
CfdP03953 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
CfdP03953 Gm12428-201ENSMUST00000119844 727 ntBASIC11.14□□□□□ -0.63
CfdP03953 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.14□□□□□ -0.63
CfdP03953 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.14□□□□□ -0.63
CfdP03953 Gm25927-201ENSMUST00000175058 117 ntBASIC11.14□□□□□ -0.63
CfdP03953 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Gm17971-201ENSMUST00000190239 806 ntBASIC11.14□□□□□ -0.63
CfdP03953 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.14□□□□□ -0.63
CfdP03953 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.14□□□□□ -0.63
CfdP03953 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.14□□□□□ -0.63
CfdP03953 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.14□□□□□ -0.63
CfdP03953 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
CfdP03953 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.14□□□□□ -0.63
CfdP03953 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
CfdP03953 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.14□□□□□ -0.63
CfdP03953 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
CfdP03953 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.14□□□□□ -0.63
CfdP03953 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CfdP03953 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CfdP03953 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CfdP03953 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
CfdP03953 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CfdP03953 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CfdP03953 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.13□□□□□ -0.63
CfdP03953 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.13□□□□□ -0.63
CfdP03953 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CfdP03953 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CfdP03953 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms