Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Apaf1O88879 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Apaf1O88879 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Apaf1O88879 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Apaf1O88879 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Apaf1O88879 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Apaf1O88879 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Apaf1O88879 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Apaf1O88879 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Apaf1O88879 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Apaf1O88879 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC17.33■□□□□ 0.37
Apaf1O88879 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC17.33■□□□□ 0.37
Apaf1O88879 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Apaf1O88879 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Apaf1O88879 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Apaf1O88879 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC17.33■□□□□ 0.37
Apaf1O88879 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Apaf1O88879 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Apaf1O88879 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Apaf1O88879 Gm8805-201ENSMUST00000117848 313 ntBASIC17.33■□□□□ 0.36
Apaf1O88879 Gm13123-201ENSMUST00000122173 492 ntBASIC17.33■□□□□ 0.36
Apaf1O88879 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC17.33■□□□□ 0.36
Apaf1O88879 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Apaf1O88879 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC17.33■□□□□ 0.36
Apaf1O88879 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Apaf1O88879 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.33■□□□□ 0.36
Apaf1O88879 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Apaf1O88879 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC17.33■□□□□ 0.36
Apaf1O88879 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Apaf1O88879 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC17.33■□□□□ 0.36
Apaf1O88879 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Apaf1O88879 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Apaf1O88879 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Apaf1O88879 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Apaf1O88879 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Apaf1O88879 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Apaf1O88879 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC17.33■□□□□ 0.36
Apaf1O88879 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC17.32■□□□□ 0.36
Apaf1O88879 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Apaf1O88879 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Apaf1O88879 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Apaf1O88879 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Apaf1O88879 Gm43423-201ENSMUST00000198390 2094 ntBASIC17.32■□□□□ 0.36
Apaf1O88879 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Apaf1O88879 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Apaf1O88879 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Apaf1O88879 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Apaf1O88879 Gm13226-201ENSMUST00000117838 404 ntBASIC17.32■□□□□ 0.36
Apaf1O88879 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Apaf1O88879 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Apaf1O88879 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.32■□□□□ 0.36
Apaf1O88879 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC17.32■□□□□ 0.36
Apaf1O88879 Gm9299-201ENSMUST00000206392 1140 ntBASIC17.32■□□□□ 0.36
Apaf1O88879 AC140451.2-201ENSMUST00000228030 664 ntBASIC17.32■□□□□ 0.36
Apaf1O88879 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Apaf1O88879 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Apaf1O88879 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Apaf1O88879 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Apaf1O88879 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Apaf1O88879 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Apaf1O88879 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Apaf1O88879 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Apaf1O88879 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Apaf1O88879 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Apaf1O88879 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Apaf1O88879 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Apaf1O88879 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Apaf1O88879 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Apaf1O88879 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Apaf1O88879 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Apaf1O88879 Gm6161-201ENSMUST00000121942 1102 ntBASIC17.31■□□□□ 0.36
Apaf1O88879 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC17.31■□□□□ 0.36
Apaf1O88879 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Apaf1O88879 Gm6254-201ENSMUST00000168178 1072 ntBASIC17.31■□□□□ 0.36
Apaf1O88879 Gm6153-201ENSMUST00000172004 1058 ntBASIC17.31■□□□□ 0.36
Apaf1O88879 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Apaf1O88879 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.31■□□□□ 0.36
Apaf1O88879 Gm37497-201ENSMUST00000195830 798 ntBASIC17.31■□□□□ 0.36
Apaf1O88879 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC17.31■□□□□ 0.36
Apaf1O88879 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC17.31■□□□□ 0.36
Apaf1O88879 Gm5641-202ENSMUST00000198699 1080 ntBASIC17.31■□□□□ 0.36
Apaf1O88879 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Apaf1O88879 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC17.31■□□□□ 0.36
Apaf1O88879 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Apaf1O88879 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Apaf1O88879 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Apaf1O88879 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Apaf1O88879 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Apaf1O88879 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Apaf1O88879 Gm45684-201ENSMUST00000210244 1571 ntBASIC17.31■□□□□ 0.36
Apaf1O88879 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Apaf1O88879 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Apaf1O88879 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
Apaf1O88879 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Apaf1O88879 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Apaf1O88879 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Apaf1O88879 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Apaf1O88879 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Apaf1O88879 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Apaf1O88879 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms