Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CcnkO88874 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CcnkO88874 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CcnkO88874 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CcnkO88874 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CcnkO88874 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.92□□□□□ -0.5
CcnkO88874 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CcnkO88874 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
CcnkO88874 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
CcnkO88874 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CcnkO88874 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CcnkO88874 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CcnkO88874 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CcnkO88874 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
CcnkO88874 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.91□□□□□ -0.5
CcnkO88874 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.91□□□□□ -0.5
CcnkO88874 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CcnkO88874 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.91□□□□□ -0.5
CcnkO88874 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CcnkO88874 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CcnkO88874 Mir449b-201ENSMUST00000104833 80 ntBASIC11.91□□□□□ -0.5
CcnkO88874 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Gm15920-201ENSMUST00000118998 402 ntBASIC11.91□□□□□ -0.5
CcnkO88874 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.91□□□□□ -0.5
CcnkO88874 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.91□□□□□ -0.5
CcnkO88874 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.91□□□□□ -0.5
CcnkO88874 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.91□□□□□ -0.5
CcnkO88874 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CcnkO88874 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CcnkO88874 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CcnkO88874 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CcnkO88874 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CcnkO88874 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CcnkO88874 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CcnkO88874 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.9□□□□□ -0.5
CcnkO88874 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CcnkO88874 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CcnkO88874 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CcnkO88874 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
CcnkO88874 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 AA543401-201ENSMUST00000164248 1269 ntBASIC11.9□□□□□ -0.5
CcnkO88874 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.9□□□□□ -0.5
CcnkO88874 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.9□□□□□ -0.5
CcnkO88874 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.9□□□□□ -0.5
CcnkO88874 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.9□□□□□ -0.5
CcnkO88874 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Mir125a-201ENSMUST00000083545 68 ntBASIC11.9□□□□□ -0.5
CcnkO88874 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CcnkO88874 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CcnkO88874 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.9□□□□□ -0.51
CcnkO88874 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CcnkO88874 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CcnkO88874 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms