Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pdlim1O70400 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pdlim1O70400 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pdlim1O70400 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pdlim1O70400 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.21□□□□□ -0.3
Pdlim1O70400 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.21□□□□□ -0.3
Pdlim1O70400 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pdlim1O70400 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Pdlim1O70400 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Pdlim1O70400 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pdlim1O70400 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pdlim1O70400 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.21□□□□□ -0.3
Pdlim1O70400 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pdlim1O70400 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pdlim1O70400 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pdlim1O70400 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.2□□□□□ -0.3
Pdlim1O70400 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.2□□□□□ -0.3
Pdlim1O70400 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.2□□□□□ -0.3
Pdlim1O70400 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.2□□□□□ -0.3
Pdlim1O70400 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.2□□□□□ -0.3
Pdlim1O70400 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.2□□□□□ -0.3
Pdlim1O70400 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.2□□□□□ -0.3
Pdlim1O70400 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Gm6244-201ENSMUST00000178732 841 ntBASIC13.2□□□□□ -0.3
Pdlim1O70400 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.2□□□□□ -0.3
Pdlim1O70400 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.2□□□□□ -0.3
Pdlim1O70400 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.2□□□□□ -0.3
Pdlim1O70400 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Pdlim1O70400 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.2□□□□□ -0.3
Pdlim1O70400 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pdlim1O70400 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.2□□□□□ -0.3
Pdlim1O70400 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.2□□□□□ -0.3
Pdlim1O70400 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.2□□□□□ -0.3
Pdlim1O70400 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pdlim1O70400 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.19□□□□□ -0.3
Pdlim1O70400 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 Gm6447-201ENSMUST00000118905 835 ntBASIC13.19□□□□□ -0.3
Pdlim1O70400 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.19□□□□□ -0.3
Pdlim1O70400 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 Gm38671-201ENSMUST00000200573 130 ntBASIC13.19□□□□□ -0.3
Pdlim1O70400 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.19□□□□□ -0.3
Pdlim1O70400 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.19□□□□□ -0.3
Pdlim1O70400 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.19□□□□□ -0.3
Pdlim1O70400 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Pdlim1O70400 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdlim1O70400 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pdlim1O70400 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.18□□□□□ -0.3
Pdlim1O70400 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Pdlim1O70400 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms