Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.73□□□□□ -0.21
Trove2O08848 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Trove2O08848 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.73□□□□□ -0.21
Trove2O08848 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.73□□□□□ -0.21
Trove2O08848 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.73□□□□□ -0.21
Trove2O08848 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trove2O08848 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Gm23935-201ENSMUST00000102303 57 ntBASIC13.73□□□□□ -0.21
Trove2O08848 Gm24270-201ENSMUST00000102326 57 ntBASIC13.73□□□□□ -0.21
Trove2O08848 Mir449b-201ENSMUST00000104833 80 ntBASIC13.73□□□□□ -0.21
Trove2O08848 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.73□□□□□ -0.21
Trove2O08848 Gm5566-201ENSMUST00000116118 459 ntBASIC13.73□□□□□ -0.21
Trove2O08848 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Gm24245-201ENSMUST00000157318 57 ntBASIC13.73□□□□□ -0.21
Trove2O08848 AA543401-201ENSMUST00000164248 1269 ntBASIC13.73□□□□□ -0.21
Trove2O08848 Gm29541-201ENSMUST00000191351 678 ntBASIC13.73□□□□□ -0.21
Trove2O08848 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Gm5779-201ENSMUST00000218467 910 ntBASIC13.73□□□□□ -0.21
Trove2O08848 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trove2O08848 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 BC001981-202ENSMUST00000191393 1545 ntBASIC13.73□□□□□ -0.21
Trove2O08848 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.73□□□□□ -0.21
Trove2O08848 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trove2O08848 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trove2O08848 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trove2O08848 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.73□□□□□ -0.21
Trove2O08848 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.73□□□□□ -0.21
Trove2O08848 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Trove2O08848 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Trove2O08848 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trove2O08848 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trove2O08848 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Gm44608-201ENSMUST00000206827 855 ntBASIC13.72□□□□□ -0.21
Trove2O08848 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.72□□□□□ -0.21
Trove2O08848 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.72□□□□□ -0.21
Trove2O08848 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.72□□□□□ -0.21
Trove2O08848 Gm8396-201ENSMUST00000057361 823 ntBASIC13.72□□□□□ -0.21
Trove2O08848 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trove2O08848 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trove2O08848 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trove2O08848 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trove2O08848 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trove2O08848 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trove2O08848 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.71□□□□□ -0.21
Trove2O08848 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trove2O08848 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trove2O08848 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trove2O08848 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trove2O08848 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trove2O08848 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trove2O08848 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trove2O08848 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trove2O08848 Gm14701-201ENSMUST00000117156 348 ntBASIC13.71□□□□□ -0.21
Trove2O08848 Gm8410-201ENSMUST00000117225 605 ntBASIC13.71□□□□□ -0.21
Trove2O08848 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.71□□□□□ -0.21
Trove2O08848 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms