Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Mir8102-201ENSMUST00000184148 139 ntBASIC13.71□□□□□ -0.21
Pcdh9F8VPK8 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.71□□□□□ -0.21
Pcdh9F8VPK8 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh9F8VPK8 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh9F8VPK8 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.71□□□□□ -0.21
Pcdh9F8VPK8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh9F8VPK8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh9F8VPK8 Gm24447-201ENSMUST00000083977 338 ntBASIC13.71□□□□□ -0.21
Pcdh9F8VPK8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh9F8VPK8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh9F8VPK8 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh9F8VPK8 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh9F8VPK8 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh9F8VPK8 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdh9F8VPK8 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh9F8VPK8 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh9F8VPK8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh9F8VPK8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh9F8VPK8 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh9F8VPK8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh9F8VPK8 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.71□□□□□ -0.22
Pcdh9F8VPK8 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh9F8VPK8 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh9F8VPK8 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh9F8VPK8 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh9F8VPK8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh9F8VPK8 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh9F8VPK8 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh9F8VPK8 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh9F8VPK8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh9F8VPK8 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdh9F8VPK8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh9F8VPK8 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.7□□□□□ -0.22
Pcdh9F8VPK8 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.7□□□□□ -0.22
Pcdh9F8VPK8 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh9F8VPK8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh9F8VPK8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh9F8VPK8 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh9F8VPK8 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh9F8VPK8 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh9F8VPK8 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh9F8VPK8 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Gm20949-201ENSMUST00000206478 952 ntBASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Gm5161-201ENSMUST00000075243 853 ntBASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh9F8VPK8 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh9F8VPK8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms