Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gm29615-201ENSMUST00000185371 697 ntBASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gm28224-201ENSMUST00000186078 697 ntBASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gm29001-201ENSMUST00000186177 697 ntBASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gm28292-201ENSMUST00000186593 697 ntBASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gm28101-201ENSMUST00000187608 697 ntBASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gm29076-201ENSMUST00000187689 697 ntBASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gm28302-201ENSMUST00000187931 697 ntBASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gm28646-201ENSMUST00000188220 697 ntBASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gm28205-201ENSMUST00000189177 697 ntBASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gm29032-201ENSMUST00000189797 697 ntBASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gm28695-201ENSMUST00000190300 697 ntBASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gm37448-201ENSMUST00000192795 697 ntBASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Mir1901-201ENSMUST00000122616 78 ntBASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Mir6998-201ENSMUST00000183343 64 ntBASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Gm32999-201ENSMUST00000192693 562 ntBASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc188F6WEU2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc188F6WEU2 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.34□□□□□ -0.27
Ccdc188F6WEU2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc188F6WEU2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc188F6WEU2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc188F6WEU2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc188F6WEU2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc188F6WEU2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc188F6WEU2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ccdc188F6WEU2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc188F6WEU2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc188F6WEU2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc188F6WEU2 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc188F6WEU2 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms