Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Ube4aE9Q735 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Ube4aE9Q735 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ube4aE9Q735 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ube4aE9Q735 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Mir7221-201ENSMUST00000184009 72 ntBASIC15.95■□□□□ 0.14
Ube4aE9Q735 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.95■□□□□ 0.14
Ube4aE9Q735 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.95■□□□□ 0.14
Ube4aE9Q735 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.95■□□□□ 0.14
Ube4aE9Q735 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.95■□□□□ 0.14
Ube4aE9Q735 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
Ube4aE9Q735 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Gm22121-201ENSMUST00000175148 54 ntBASIC15.94■□□□□ 0.14
Ube4aE9Q735 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Gm21769-201ENSMUST00000211922 111 ntBASIC15.94■□□□□ 0.14
Ube4aE9Q735 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.94■□□□□ 0.14
Ube4aE9Q735 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.94■□□□□ 0.14
Ube4aE9Q735 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ube4aE9Q735 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Gm8738-201ENSMUST00000172606 329 ntBASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms